Longevity & AgingResearch PaperOpen Access

Blocking NRF1 Slows Cellular Aging and Extends Lifespan in Mice

A new Nature Communications study identifies NRF1 as a master driver of inflammaging via the TBK1/IRF3 innate immune axis.

Tuesday, June 23, 2026 0 views
Published in Nat Commun
A fluorescence microscopy image of aged mouse fibroblast cells stained blue-green for SA-beta-galactosidase activity, with a researcher's gloved hand adjusting a microscope focus knob in the background of a dimly lit lab.

Summary

Researchers at Nankai University discovered that the transcription factor NRF1 orchestrates the chronic inflammation tied to aging — called inflammaging — by switching on key innate immune genes TBK1 and IRF3. When cells sustain DNA damage, the enzyme ATM phosphorylates NRF1 at a specific site (Ser393), amplifying inflammatory signaling and accelerating cellular senescence. Knocking down NRF1 in mouse fibroblasts reduced senescence markers, cut inflammatory secretions, and restored cell-cycle activity. In aged mice, NRF1 knockdown treatment reduced signs of organ aging and meaningfully extended lifespan. The findings position NRF1 as a druggable target that could suppress the senescence-associated secretory phenotype (SASP) without the off-target tissue damage seen with current senolytic drugs.

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Detailed Summary

Inflammaging — the chronic, low-grade sterile inflammation that accumulates with age — is widely recognized as a key driver of age-related disease, but the precise molecular switches that connect DNA damage, innate immunity, and the senescence-associated secretory phenotype (SASP) have remained poorly defined. This study from Nankai University's Center for Aging and Regeneration, published in Nature Communications (December 2025), identifies nuclear respiratory factor 1 (NRF1) as a critical transcriptional hub linking these processes, and demonstrates that suppressing NRF1 can meaningfully delay aging across multiple biological scales.

The research team first established that NRF1 expression correlates positively with established senescence markers in human tissue data (GTEx) across the heart, liver, kidney, muscle, blood, and stomach, and in mouse organ datasets (GSE132040). In primary mouse embryonic fibroblasts (Primary MEFs), NRF1 protein — but not mRNA — rose progressively following senescence induction with etoposide, doxorubicin, or H₂O₂, paralleling increases in P16, P21, P53, and γH2AX. Ionizing radiation (7.5 Gy) in 8-week-old C57BL/6J mice similarly elevated NRF1 protein in heart, liver, and kidney tissues, confirming the pattern in vivo.

Functionally, siRNA-mediated NRF1 knockdown in Primary MEFs dramatically reduced etoposide-induced SA-β-galactosidase staining, suppressed senescent markers (P53, P21, P16, γH2AX), restored EdU incorporation and Ki67 positivity (indicating resumed proliferation), and decreased SASP gene expression including Il-6, Cxcl1, and Mmp13 (all p < 0.05 by two-way ANOVA with Tukey correction, n = 3–6 independent experiments). Cell-cycle analysis showed NRF1 knockout increased G2/M-phase cells and attenuated the etoposide-induced S-phase block. These effects were reproduced with two independent siRNA sequences and extended to MEF cell lines.

Mechanistically, chromatin immunoprecipitation (ChIP) and transcriptomic analyses revealed that NRF1 directly binds and transcriptionally activates the promoters of Tbk1 and Irf3 — two central nodes in the innate immune pathway required for type I interferon production and SASP amplification. NRF1 deficiency suppressed TBK1 and IRF3 expression, blunted downstream IRF3 phosphorylation, and reduced type I IFN and pro-inflammatory cytokine secretion. The team further showed that DNA damage activates ATM kinase, which phosphorylates NRF1 specifically at Serine 393. This phosphorylation event promotes NRF1 oligomerization and enhances its DNA-binding affinity at Tbk1/Irf3 promoters, creating a feed-forward loop that amplifies SASP during genotoxic stress.

In aged mice, systemic NRF1 knockdown via siRNA-lipid nanoparticle delivery reduced multi-organ aging phenotypes including SA-β-gal positivity, inflammatory cytokine levels, and tissue fibrosis markers. Critically, treated aged mice showed extended lifespan compared to controls, though the exact magnitude of lifespan extension requires verification in larger cohorts. The authors propose that targeting the ATM–NRF1–TBK1/IRF3–type I IFN axis represents a senomorphic strategy — suppressing SASP without killing senescent cells — thereby potentially avoiding the wound-healing impairment associated with senolytic agents. NRF1's context-dependent role (previously linked to mitochondrial biogenesis) adds complexity, and tissue-specific delivery strategies will be needed for translational applications.

Key Findings

  • NRF1 protein levels rose progressively in primary MEFs following senescence induction with etoposide, doxorubicin, or H₂O₂, correlating with increases in P16, P21, P53, and γH2AX, while mRNA levels remained unchanged — suggesting post-transcriptional stabilization.
  • NRF1 knockdown (siRNA) significantly reduced SA-β-galactosidase-positive cells in etoposide-treated Primary MEFs (n = 6 independent experiments, p < 0.001 by two-way ANOVA with Tukey's test), indicating delayed senescence.
  • NRF1-KD restored EdU incorporation and Ki67 positivity in etoposide-induced senescent MEFs (n = 6 experiments, p < 0.05–0.001), demonstrating rescue of proliferative capacity.
  • SASP factors Il-6, Cxcl1, and Mmp13 were significantly decreased in NRF1-KD Primary MEFs following etoposide treatment (n = 3 experiments, p < 0.05–0.001).
  • ChIP assays confirmed direct NRF1 binding to Tbk1 and Irf3 promoters; NRF1 deficiency reduced TBK1/IRF3 expression, blunting type I IFN production and downstream innate immune activation.
  • ATM kinase phosphorylates NRF1 at Ser393 following DNA damage, promoting NRF1 oligomerization and enhanced promoter binding at Tbk1/Irf3, creating a pro-inflammatory feed-forward loop.
  • Systemic NRF1 knockdown in aged mice reduced multi-organ aging phenotypes (SA-β-gal, inflammatory cytokines, fibrosis markers) and extended lifespan compared to control-treated aged mice.

Methodology

The study used primary murine embryonic fibroblasts (Primary MEFs) from C57BL/6J mice and MEF cell lines, with senescence induced by etoposide, doxorubicin, or H₂O₂; NRF1 was knocked down using two validated independent siRNAs, or genetically knocked out. In vivo aging was modeled by 7.5 Gy ionizing radiation in 8-week-old mice and by natural aging cohorts. Human data came from GTEx and mouse aging transcriptomics from GSE132040. Statistical analyses employed two-way ANOVA with Tukey's multiple-comparisons test; sample sizes ranged from n = 2–3 mice per group for tissue studies to n = 3–6 independent cell experiments per condition.

Study Limitations

The in vivo lifespan extension data in aged mice, while promising, are presented with limited cohort sizes and the magnitude of the effect requires replication in larger, independently powered studies. NRF1 plays well-established roles in mitochondrial biogenesis and metabolism, meaning chronic or systemic suppression could have unintended metabolic consequences not fully explored here. The authors do not report conflicts of interest; funding was provided by the National Natural Science Foundation of China and the Chinese Ministry of Science and Technology.

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